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  5. Vocar.0110s0006.1

Vocar.0110s0006.1 (32893568)


Aliases : 32893568

Description : Peptidase M50; PDZ domain 6 [Interproscan].


Gene families : OG_01_0002405 (OrthoFinder) Phylogenetic Tree(s): OG0002405_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0110s0006.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre03.g144164 30786891, RSE2 Protein modification.peptide maturation.plastid.AraSP... 0.04 OrthoFinder
Dusal.1188s00002.1 33199539 Peptidase M50 [Interproscan]. 0.06 OrthoFinder
PTI_19G00190.1 No alias Peptidase M50 [Interproscan]. 0.02 OrthoFinder
Sro155_g070480.1 Contig395.g5355 Probable membrane metalloprotease ARASP2, chloroplastic 0.02 OrthoFinder
Transcript_contig_54187 54187 Peptidase M50; PDZ domain 6 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497421.1_1150 KAA8497421 Putative zinc metalloprotease 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR041489 PDZ_6 346 397
IPR008915 Peptidase_M50 136 578
No external refs found!