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  5. Vocar.0082s0001.1

Vocar.0082s0001.1 (32886964)


Aliases : 32886964

Description : Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0082s0001.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.58 tig00000711_g3420.t1 Potassium channel KOR1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00000851.5 tig00000851_g4889.t1 Putative cyclic nucleotide-gated ion channel 8... 0.04 OrthoFinder
Cpa|evm.model.tig00001127.26 tig00001127_g7159.t1 Potassium channel KAT1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cpa|evm.model.tig00021319.15 tig00021319_g20210.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021348.58 tig00021348_g20561.t1 Putative cyclic nucleotide-gated ion channel 8... 0.03 OrthoFinder
Cre01.g003751 30789533 No description available 0.02 OrthoFinder
Cre02.g098750 30785469 No description available 0.02 OrthoFinder
Cre05.g243454 30783299 Potassium channel KOR2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre10.g450100 30789833 Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre12.g553450 30793567, CNG1 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre12.g553900 30793362, CNG2 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre16.g670754 30777028 Potassium channel SKOR OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g706900 30782036, CNG3 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cz05g22050.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Cz05g35200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Cz12g12240.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Cz15g15200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.04 OrthoFinder
Dusal.0329s00009.1 33198134 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
EOD10747 No alias Cyclic nucleotide binding K+ channel [Ensembl]. 0.03 OrthoFinder
SymbC1.scaffold1785.1 1785.1 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3638.5 3638.5 Potassium channel domain; Cyclic nucleotide-binding... 0.01 OrthoFinder
TP03G02790.1 No alias Cyclic nucleotide-binding domain; Ion transport domain... 0.01 OrthoFinder
XM_002500154.1 MICPUN_98786, 98786 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_002500831.1 MICPUN_56797, 56797 Voltage-gated ion channel superfamily 0.04 OrthoFinder
XM_002500883.1 MICPUN_56911, 56911 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_002504550.1 MICPUN_61321, 61321 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10809.1_5286 HaLaN_06192, GFH10809 Cyclic nucleotide-binding domain-containing protein 0.04 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10810.1_5287 HaLaN_06193, GFH10810 Cyclic nucleotide-binding domain-containing protein 0.04 OrthoFinder
lcl|BLLF01001221.1_cds_GFH17913.1_12390 HaLaN_14637, GFH17913 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 2478 2561
No external refs found!