- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 32892088
Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0003158 (OrthoFinder) Phylogenetic Tree(s): OG0003158_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0042s0105.1 | |
| Cluster | HCCA: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000893.5 | tig00000893_g5348.t1 | No description available | 0.02 | OrthoFinder | |
| Cre16.g685200 | 30778004 | No description available | 0.04 | OrthoFinder | |
| Cz03g11190.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.0244s00016.1 | 33186516 | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD12070 | No alias | RNA recognition motif domain [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_10G00250.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro737_g195080.1 | Contig1367.g12567 | Multiple RNA-binding domain-containing protein 1 | 0.03 | OrthoFinder | |
| TP04G04110.1 | No alias | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002501431.1 | MICPUN_81062, 81062 | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003057974.1 | MicpuC2_16164, 16164 | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000341.1_cds_GFH10734.1_5211 | HaLaN_06100, GFH10734 | Hypothetical protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Enrichment |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
| MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| No external refs found! |