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  5. Vocar.0040s0016.1

Vocar.0040s0016.1 (32886228)


Aliases : 32886228

Description : Major facilitator, sugar transporter-like [Interproscan].


Gene families : OG_01_0000043 (OrthoFinder) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0040s0016.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cre03.g206800 30788187, HXT1 Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder
Dusal.0083s00002.1 33186062 Major facilitator, sugar transporter-like [Interproscan]. 0.02 OrthoFinder
EOD37210 No alias Major facilitator, sugar transporter-like [Interproscan]. 0.02 OrthoFinder
EOD39599 No alias Major facilitator, sugar transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44464.1_2336 PRW44464 Sugar transport 10-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 7 204
IPR005828 MFS_sugar_transport-like 589 797
No external refs found!