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  5. Vocar.0024s0041.1

Vocar.0024s0041.1 (32890321)


Aliases : 32890321

Description : Multi antimicrobial extrusion protein [Interproscan].


Gene families : OG_01_0000080 (OrthoFinder) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0024s0041.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre01.g014150 30788361 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder
Cz16g03090.t1 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.02 OrthoFinder
Dusal.0394s00009.1 33202268 Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
Sro36_g022690.2 No alias Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
Transcript_contig_2311 2311 Multi antimicrobial extrusion protein [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000739.1_cds_GFH14541.1_9018 HaLaN_10618, GFH14541 Multidrug and toxic compound extrusion protein 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56780.1_9796 PRW56780 DETOXIFICATION 16-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 62 222
IPR002528 MATE_fam 283 449
No external refs found!