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  5. Vocar.0024s0005.1

Vocar.0024s0005.1 (32890284)


Aliases : 32890284

Description : ABC transporter-like [Interproscan].


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0024s0005.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre14.g615950 30776520 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz13g02110.t1 No alias Four helical bundle domain; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_02G04850.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro1610_g285810.1 Contig4416.g33186 [NU+] prion formation protein 1 0.01 OrthoFinder
Sro672_g185120.1 Contig919.g9660 [NU+] prion formation protein 1 0.01 OrthoFinder
SymbC1.scaffold793.3 793.3 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold847.8 847.8 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
XM_003061895.1 MicpuC2_28864, 28864 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06140.1_617 HaLaN_00719, GFH06140 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000351.1_cds_GFH10832.1_5309 HaLaN_06220, GFH10832 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001640.1_cds_GFH20464.1_14941 HaLaN_17589, GFH20464 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006808 regulation of nitrogen utilization IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 803 1035
IPR003439 ABC_transporter-like_ATP-bd 555 688
No external refs found!