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  5. Vocar.0019s0238.1

Vocar.0019s0238.1 (32892633)


Aliases : 32892633

Description : HD domain; RelA/SpoT [Interproscan].


Gene families : OG_01_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0019s0238.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000545.31 tig00000545_g2004.t1 Probable GTP diphosphokinase RSH3, chloroplastic... 0.01 OrthoFinder
Cpa|evm.model.tig00020961.58 tig00020961_g16680.t1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.01 OrthoFinder
Dusal.0004s00059.1 33201050 RelA/SpoT; HD domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56372 56372 HD domain; TGS; RelA/SpoT [Interproscan]. 0.01 OrthoFinder
UNPLg00334.t1 No alias ACT domain; RelA/SpoT; TGS; HD domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001840.1_cds_GFH21492.1_15969 HaLaN_18807, GFH21492 RSH 0.01 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20358.1_5516 PRW20358 GTP diphosphokinase chloroplastic isoform X1 isoform A 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497862.1_6815 KAA8497862 Putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004383 guanylate cyclase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006182 cGMP biosynthetic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030991 intraciliary transport particle A IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0046068 cGMP metabolic process IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 409 524
No external refs found!