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  5. Vocar.0017s0009.1

Vocar.0017s0009.1 (32891450)


Aliases : 32891450

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0017s0009.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.245 tig00000093_g3667.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000254.4 tig00000254_g22450.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000769.24 tig00000769_g4018.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000789.56 tig00000789_g4149.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000789.57 tig00000789_g4149.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000882.13 tig00000882_g5258.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020563.92 tig00020563_g11279.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020604.23 tig00020604_g11859.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020830.67 tig00020830_g14450.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021133.7 tig00021133_g18906.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.35 tig00021537_g22287.t1 No description available 0.02 OrthoFinder
Cre07.g333535 30775361 No description available 0.04 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.04 OrthoFinder
Cre11.g467528 30775695, CAV4 No description available 0.02 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.05 OrthoFinder
Cre16.g665100 30777025, CAV3 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.04 OrthoFinder
Cre16.g667451 30777477 No description available 0.03 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.05 OrthoFinder
Cz08g19170.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.03 OrthoFinder
Dusal.0502s00006.1 33199153 Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_06G02060.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_18G00730.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
TP04G00320.1 No alias Voltage-dependent L-type calcium channel, IQ-associated... 0.01 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.04 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.04 OrthoFinder
XM_003062020.1 MicpuC2_21004, 21004 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11379.1_5856 HaLaN_06866, GFH11379 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000954.1_cds_GFH16151.1_10628 HaLaN_12520, GFH16151 Voltage-gated Ca2+ channel, alpha subunit 0.03 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.02 OrthoFinder
lcl|BLLF01004618.1_cds_GFH29963.1_24440 HaLaN_28722, GFH29963 Voltage-gated Ca2+ channel, alpha subunit 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495059.1_3589 KAA8495059 Sodium channel protein type 10 subunit alpha 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 3363 3602
IPR005821 Ion_trans_dom 576 816
IPR005821 Ion_trans_dom 103 462
IPR005821 Ion_trans_dom 3020 3312
No external refs found!