Aliases : 32898850
Description : WD40 repeat; U box domain [Interproscan].
Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Vocar.0015s0344.1 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz07g19110.t1 | No alias | U box domain [Interproscan]. | 0.02 | OrthoFinder | |
EOD28800 | No alias | BspA type Leucine rich repeat region; RNA recognition... | 0.02 | OrthoFinder | |
OT_09G00020.1 | No alias | U box domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|LHPG02000025.1_cds_PRW20231.1_5682 | PRW20231 | U-box domain-containing 4 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
MF | GO:0003756 | protein disulfide isomerase activity | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Enrichment |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
BP | GO:0019321 | pentose metabolic process | IEP | Enrichment |
BP | GO:0019566 | arabinose metabolic process | IEP | Enrichment |
BP | GO:0046373 | L-arabinose metabolic process | IEP | Enrichment |
MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 56 | 125 |
IPR001680 | WD40_repeat | 147 | 180 |
IPR001680 | WD40_repeat | 345 | 380 |
IPR001680 | WD40_repeat | 305 | 340 |
IPR001680 | WD40_repeat | 185 | 220 |
IPR001680 | WD40_repeat | 265 | 300 |
IPR001680 | WD40_repeat | 385 | 420 |
IPR001680 | WD40_repeat | 426 | 460 |
IPR001680 | WD40_repeat | 225 | 260 |
No external refs found! |