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  5. Vocar.0015s0182.1

Vocar.0015s0182.1 (32898823)


Aliases : 32898823

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0182.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cre03.g174050 30787660, MRP4 Solute transport.primary active transport.ABC... 0.04 OrthoFinder
Cz10g17230.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
PTI_02G00250.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro2938_g340630.1 Contig1091.g10559 Oligomycin resistance ATP-dependent permease YOR1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 512 742
IPR011527 ABC1_TM_dom 189 284
IPR003439 ABC_transporter-like_ATP-bd 394 514
IPR003439 ABC_transporter-like_ATP-bd 811 962
No external refs found!