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  5. Vocar.0006s0003.1

Vocar.0006s0003.1 (32894139)


Aliases : 32894139

Description : Sec1-like protein [Interproscan].


Gene families : OG_01_0003047 (OrthoFinder) Phylogenetic Tree(s): OG0003047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0003.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Dusal.0481s00009.1 33201475 Sec1-like protein [Interproscan]. 0.04 OrthoFinder
Sro196_g083420.1 Contig3206.g25338 Protein sorting-associated protein 45 0.04 OrthoFinder
lcl|BLLF01001752.1_cds_GFH21045.1_15522 HaLaN_18272, GFH21045 VPS33 protein 0.02 OrthoFinder
lcl|VRMN01000020.1_cds_KAA8490664.1_4706 KAA8490664 Vacuolar protein sorting-associated protein 45 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001619 Sec1-like 322 423
IPR001619 Sec1-like 44 319
No external refs found!