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  5. Vocar.0003s0436.1

Vocar.0003s0436.1 (32889288)


Aliases : 32889288

Description : PAS domain [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0003s0436.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.36 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000025.37 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000025.38 tig00000025_g7945.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000025.39 tig00000025_g7945.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000246.18 tig00000246_g21511.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000881.20 tig00000881_g5233.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020902.30 tig00020902_g14981.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021522.9 tig00021522_g22101.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.33 tig00021537_g22286.t1 No description available 0.03 OrthoFinder
Cre02.g142166 30786493 No description available 0.02 OrthoFinder
Cre05.g233650 30783131, FXL9 No description available 0.04 OrthoFinder
Cre07.g319650 30775131, FXL4 No description available 0.02 OrthoFinder
Cre09.g397000 30780571 No description available 0.02 OrthoFinder
Cre09.g397050 30781546 No description available 0.02 OrthoFinder
Cre10.g457331 30790915 No description available 0.03 OrthoFinder
Cre10.g457400 30790407 No description available 0.04 OrthoFinder
Cre13.g586700 30784046 No description available 0.03 OrthoFinder
Cre13.g587550 30783866 No description available 0.02 OrthoFinder
Cre17.g698903 30781618 No description available 0.04 OrthoFinder
Cre17.g708000 30782648, FAP260 No description available 0.02 OrthoFinder
Cz03g02250.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz04g22190.t1 No alias Hypothetical protein 0.01 OrthoFinder
Cz04g22210.t1 No alias PAS fold [Interproscan]. 0.02 OrthoFinder
Dusal.0012s00037.1 33201991 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0012s00038.1 33201994 Hypothetical protein 0.03 OrthoFinder
Dusal.0051s00004.1 33199001 PAS domain [Interproscan]. 0.05 OrthoFinder
Dusal.0051s00005.1 33198985 PAS fold [Interproscan]. 0.03 OrthoFinder
Dusal.0065s00022.1 33185844 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0469s00006.1 33191675 Hypothetical protein 0.02 OrthoFinder
Dusal.0469s00009.1 33191669 PAS domain [Interproscan]. 0.01 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.04 OrthoFinder
Sro28_g018720.1 Contig404.g5481 Sensor protein FixL 0.01 OrthoFinder
UNPLg00190.t1 No alias Hypothetical protein 0.01 OrthoFinder
Vocar.0001s0015.1 32886137 PAS fold [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0255.1 32883849 PAS domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000096.1_cds_GFH07471.1_1948 HaLaN_02275, GFH07471 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000097.1_cds_GFH07482.1_1959 HaLaN_02288, GFH07482 PAS domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000429.1_cds_GFH11722.1_6199 HaLaN_07268, GFH11722 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000513.1_cds_GFH12539.1_7016 HaLaN_08248, GFH12539 PAS domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000662.1_cds_GFH13879.1_8356 HaLaN_09841, GFH13879 Tiny macrocysts protein B 0.02 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001584.1_cds_GFH20156.1_14633 HaLaN_17235, GFH20156 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002984.1_cds_GFH25993.1_20470 HaLaN_24060, GFH25993 PAS domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01006378.1_cds_GFH32196.1_26673 HaLaN_31377, GFH32196 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 626 713
No external refs found!