Vocar.0001s0831.1 (32884659)

Aliases : 32884659

Description : Archaeal/bacterial/fungal rhodopsins; Histidine kinase/HSP90-like ATPase; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain [Interproscan].

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0001s0831.1
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000042.236	tig00000042_g15634.t1	Probable histidine kinase 3 OS=Oryza sativa subsp. indica	0.02	OrthoFinder
Cpa\|evm.model.tig00000158.93	tig00000158_g10200.t1	Probable histidine kinase 5 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder
Cpa\|evm.model.tig00000190.40	tig00000190_g13861.t1	Ethylene receptor OS=Nicotiana tabacum	0.03	OrthoFinder
Cpa\|evm.model.tig00000237.35	tig00000237_g20484.t1	Histidine kinase 5 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00000403.48	tig00000403_g305.t1	Ethylene response sensor 1 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00001331.12	tig00001331_g8175.t1	Histidine kinase 2 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00020610.13	tig00020610_g11951.t1	Histidine kinase 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00020941.45	tig00020941_g16237.t1	Probable histidine kinase 3 OS=Oryza sativa subsp. indica	0.01	OrthoFinder
Cpa\|evm.model.tig00021179.53	tig00021179_g19270.t1	Probable histidine kinase 5 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder
Cre02.g074150	30785488, COP5	Histidine kinase 5 OS=Arabidopsis thaliana	0.04	OrthoFinder
Cre11.g467678	30775629, COP6	Histidine kinase 5 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cre17.g733150	30781867	Histidine kinase 3 OS=Arabidopsis thaliana	0.03	OrthoFinder
Dusal.0121s00016.1	33195076	Signal transduction response regulator, receiver domain...	0.01	OrthoFinder
Dusal.0198s00010.1	33192678	Signal transduction response regulator, receiver domain;...	0.02	OrthoFinder
Dusal.0212s00008.1	33202594	Signal transduction response regulator, receiver domain;...	0.03	OrthoFinder
Dusal.0675s00001.1	33202443	Histidine kinase/HSP90-like ATPase [Interproscan].	0.03	OrthoFinder
Dusal.0675s00003.1	33202441	Archaeal/bacterial/fungal rhodopsins [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000561.1_cds_GFH12981.1_7458	HaLaN_08775, GFH12981	Signal transduction histidine kinase,...	0.03	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60699.1_4145	PRW60699	Hybrid sensor histidine kinase response regulator	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Enrichment
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0008276	protein methyltransferase activity	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Enrichment
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Enrichment
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0042054	histone methyltransferase activity	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	1063	1139
IPR001425	Arc/bac/fun_rhodopsins	108	288
IPR003661	HisK_dim/P	321	380
IPR003594	HATPase_C	450	648

External Links

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Vocar.0001s0831.1 (32884659)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation