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  5. Vocar.0001s0015.1

Vocar.0001s0015.1 (32886137)


Aliases : 32886137

Description : PAS fold [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0001s0015.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001443.3 tig00001443_g8748.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021522.9 tig00021522_g22101.t1 No description available 0.02 OrthoFinder
Cre02.g142166 30786493 No description available 0.05 OrthoFinder
Cre05.g233650 30783131, FXL9 No description available 0.03 OrthoFinder
Cre09.g397000 30780571 No description available 0.04 OrthoFinder
Cre10.g457331 30790915 No description available 0.02 OrthoFinder
Cre10.g457400 30790407 No description available 0.02 OrthoFinder
Cre13.g586700 30784046 No description available 0.02 OrthoFinder
Cre13.g587550 30783866 No description available 0.02 OrthoFinder
Cre17.g698903 30781618 No description available 0.03 OrthoFinder
Cz03g08250.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz03g29010.t1 No alias PAS domain [Interproscan]. 0.04 OrthoFinder
Cz06g35280.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz06g35290.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz18g03020.t1 No alias PAS domain [Interproscan]. 0.03 OrthoFinder
Dusal.0469s00009.1 33191669 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.03 OrthoFinder
EOD05797 No alias PAS domain [Interproscan]. 0.01 OrthoFinder
Sro28_g018720.1 Contig404.g5481 Sensor protein FixL 0.01 OrthoFinder
Sro448_g145160.1 Contig3664.g28291 Sensor protein FixL 0.01 OrthoFinder
UNPLg00190.t1 No alias Hypothetical protein 0.02 OrthoFinder
Vocar.0003s0436.1 32889288 PAS domain [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0459.1 32888951 Hypothetical protein 0.02 OrthoFinder
Vocar.0005s0217.1 32883525 PAS domain [Interproscan]. 0.03 OrthoFinder
Vocar.0005s0255.1 32883849 PAS domain [Interproscan]. 0.04 OrthoFinder
Vocar.0012s0063.1 32895032 PAS domain [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0101.1 32895906 PAS domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000217.1_cds_GFH09211.1_3688 HaLaN_04313, GFH09211 PAS domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000301.1_cds_GFH10266.1_4743 HaLaN_05548, GFH10266 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045765 regulation of angiogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051239 regulation of multicellular organismal process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901342 regulation of vasculature development IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:2000026 regulation of multicellular organismal development IEP Enrichment
InterPro domains Description Start Stop
IPR013767 PAS_fold 643 721
No external refs found!