TPMG00660.1


Description : Cytochrome b/b6, N-terminal; Heat shock factor (HSF)-type, DNA-binding [Interproscan].


Gene families : OG_01_0005035 (OrthoFinder) Phylogenetic Tree(s): OG0005035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TPMG00660.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
CzCPg01070.t1 No alias Cytochrome b/b6, N-terminal [Interproscan]. 0.04 OrthoFinder
CzMTg00010.t1 No alias Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal... 0.04 OrthoFinder
CzMTg00020.t1 No alias Homing endonuclease, LAGLIDADG [Interproscan]. 0.05 OrthoFinder
Sro51_chlor_g030360.1 PetB PetB 0.04 OrthoFinder
Vocar.0055s0051.1 32891626 Cytochrome b/b6, N-terminal; Homing endonuclease,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 25 128
IPR000232 HSF_DNA-bd 336 442
IPR005797 Cyt_b/b6_N 25 119
No external refs found!