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Heatmap: Cluster_22 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
12pM Fe,Midday
12pM Fe,Midnight
58pM Fe,Midday
58pM Fe,Midnight
233pM Fe,Midnight
1160pM Fe,Midday
1160pM Fe,Midnight
High carbon,Dark
High carbon,Light
Low carbon,Dark
Phloroglucinol
Silicon starvation,12h
-2.77 0.32 -1.4 0.59 0.67 -3.73 -0.09 1.24 -0.0 -0.33 -0.87 0.5
1.15 -0.09 0.44 -0.85 -1.89 -0.01 -1.89 0.08 -0.03 -0.29 0.53 0.13
-2.06 -0.43 -2.98 -0.4 -0.05 -1.8 -0.47 1.79 0.44 0.12 -0.3 0.53
0.33 0.63 -0.59 0.2 -0.62 -0.67 -0.99 1.36 -1.49 - 1.03 -0.64
1.08 0.02 0.68 -0.37 -1.42 -0.21 -1.17 0.47 -0.21 -1.17 0.07 0.08
- -1.98 -1.19 -1.11 -0.7 -4.1 0.72 2.04 0.07 -0.31 0.98 -0.83
-2.17 -2.12 -2.35 -1.29 -0.53 -5.58 1.66 1.48 0.23 - 0.88 0.34
0.7 0.25 -0.0 0.02 -0.22 -0.9 0.57 0.78 -0.63 -1.45 0.33 -1.74
-0.18 0.26 -0.03 -0.74 -2.86 -1.79 -0.62 1.72 -0.01 0.11 0.66 -1.67
0.49 0.83 0.62 0.67 0.37 -0.05 0.08 0.22 -1.18 -1.18 -3.72 -2.0
1.5 0.26 0.02 -0.87 -1.0 0.44 -2.67 0.42 -0.15 -0.52 -2.53 0.38
0.01 - - -3.16 - - - 1.91 1.73 0.71 1.12 -
- - - -1.36 - - -2.52 2.3 -0.17 0.47 2.09 -
- 0.41 - - - - - 1.98 -0.72 - 2.61 -
- -0.95 - -1.08 - - 1.5 1.11 -0.08 0.71 1.52 -0.8
- - - -3.86 - - -3.49 1.56 0.1 1.02 0.91 1.97
- -4.91 -2.12 -3.06 -3.4 -2.64 -2.72 2.56 0.48 -1.24 1.06 0.49
1.18 -2.08 -0.31 -1.26 -0.4 -0.78 -0.46 1.09 0.4 - 0.98 -0.37
-2.93 -0.08 -2.1 -0.47 0.64 -6.12 -0.41 1.58 -1.25 1.09 -0.76 0.58
-1.04 1.29 -2.21 0.37 0.42 -3.65 0.75 0.68 0.36 -1.33 -0.68 -0.85
0.6 0.46 0.08 -0.26 -0.47 -0.37 -0.64 0.1 -0.67 -0.78 -0.66 1.11
0.55 0.82 -0.33 0.06 -0.3 -1.67 0.17 0.81 -0.18 -0.65 0.06 -1.44
-0.36 0.06 -0.69 0.34 0.22 -1.32 0.24 0.56 0.32 0.32 -1.05 0.14
- -4.25 - -6.27 - -6.47 -4.35 2.45 1.41 - 1.76 -1.52
- - - -2.28 - - -3.27 2.53 1.85 - -1.47 0.96
1.58 -0.31 1.16 -1.29 -2.32 0.47 -2.58 0.13 -0.3 0.45 -2.96 -1.29
0.09 0.58 -0.33 -0.15 -1.86 -0.62 -1.11 1.52 0.95 0.41 -3.72 -2.76
0.31 0.18 -0.32 -0.78 -0.84 -0.64 -0.31 -0.07 -0.54 0.31 0.48 0.97
-0.3 -1.01 -1.35 -1.03 -0.66 -0.04 -1.95 1.11 0.03 -0.15 1.61 -0.32
-0.99 - -1.75 -1.86 -2.26 -4.14 -2.12 2.4 0.54 - 1.65 -0.8
0.48 1.11 -0.18 -0.18 -0.05 -0.56 -1.05 0.05 -0.62 -0.1 -1.21 0.58
- - - -1.77 -0.68 -3.41 -1.74 1.8 0.08 1.48 0.5 0.96
-0.12 0.43 -0.88 0.02 0.69 -1.08 -0.62 0.42 -0.13 1.27 -0.49 -3.79
-0.82 0.18 0.33 0.3 -0.45 -0.64 -0.81 0.8 0.07 -1.02 0.18 0.53
0.61 -0.55 0.13 -0.34 -2.98 0.93 -1.74 0.31 -0.03 -1.39 1.3 -0.98
-0.57 0.3 -0.59 -0.17 -1.26 -1.04 -0.8 1.77 0.62 0.8 -2.43 -2.55
- - - 1.61 - - - 1.72 2.49 - - -
0.28 0.47 -0.49 -0.47 -0.41 -0.69 -1.68 1.3 -0.4 -1.28 0.27 0.54
0.41 0.55 0.11 -0.31 -0.72 -0.31 -0.56 0.31 0.16 -0.13 0.37 -0.58
-0.71 0.31 -3.21 0.12 -1.39 -1.99 -1.77 2.46 0.02 -2.33 -0.13 -1.26
-0.32 0.32 -2.08 -0.13 -1.35 -1.06 -0.45 1.61 0.15 -0.2 0.5 -0.4
0.97 0.65 0.53 0.07 -1.08 -0.88 -0.33 0.98 0.36 -0.92 -1.9 -3.02
-0.02 0.33 0.17 0.01 -1.0 -0.55 -1.95 1.58 0.49 -1.54 -1.16 -0.02
0.02 0.45 -1.48 -0.14 -0.08 -1.29 -0.46 0.6 0.16 -1.19 0.48 0.86
0.62 0.4 -0.09 0.06 -0.8 -1.21 -2.34 0.9 -0.25 0.62 -0.55 0.04
-6.14 -4.09 -6.32 -5.56 -1.45 - -6.48 2.9 1.81 -0.92 -5.5 -6.96
-0.08 -0.04 -0.85 -1.22 -1.93 -1.78 -1.42 1.58 0.53 - 1.3 0.33
-1.3 -1.25 - -0.02 -0.87 -3.5 -0.1 1.81 -0.28 -1.6 0.98 0.98
0.38 0.16 -0.38 -0.56 -0.71 -0.36 -1.84 0.98 -0.13 0.5 0.63 -0.7
1.2 -0.44 0.8 -2.02 -2.08 0.64 -2.27 0.59 -0.01 -0.73 -0.2 0.02
0.22 0.1 -0.57 0.27 -0.41 -2.0 0.78 1.01 -0.13 -0.04 -0.84 -0.54
0.69 0.29 0.64 -0.04 -0.13 -1.24 0.16 0.34 -0.51 -1.22 0.5 -1.4
- - - - - - - 3.26 1.29 - - -
-3.27 -4.22 -3.45 - - -2.96 -2.51 2.07 0.83 0.23 2.1 -
- - - 0.66 -1.37 - -0.02 2.37 -0.69 - 1.71 -
- 0.54 -0.27 0.09 -0.76 -3.18 1.18 1.52 0.24 - 0.72 -
0.81 0.36 -0.51 -0.24 -0.96 -1.02 -1.49 1.04 -0.49 -1.0 1.14 -0.78
0.01 0.06 -1.17 0.03 0.06 0.06 -1.91 0.97 -0.54 0.71 0.01 -0.22
0.55 0.4 -0.11 -0.55 -0.12 -0.42 -1.11 0.77 -0.49 -0.79 -1.55 1.1
0.54 0.02 0.19 -0.5 -0.9 0.0 -0.9 0.38 -0.06 -0.2 0.48 0.11
-1.31 - - -3.48 -2.58 -1.87 -5.21 1.68 -1.87 2.39 1.07 -2.13
- -0.18 -2.57 0.07 -0.95 -2.41 0.83 1.95 -0.57 -1.69 1.1 -1.21
-0.7 -0.08 -0.88 0.99 -0.64 -1.24 0.46 1.17 -3.82 -0.0 0.85 -1.52
-0.21 0.56 -0.92 1.05 -0.37 -1.32 0.77 0.8 -0.37 -2.21 -0.59 -0.33
0.37 0.23 -0.17 -0.23 -0.43 -0.4 -0.56 -0.08 -0.64 0.15 -0.63 1.18
-0.22 - - 0.15 -1.49 -1.46 0.0 1.2 0.69 0.48 1.59 -
- - - - - - - 2.55 2.62 - - -
- 0.87 0.06 -0.54 -2.01 - -1.69 1.82 -0.59 - 1.59 -0.58
- -1.07 -0.29 0.3 -0.57 -2.32 -0.53 0.84 -0.2 1.17 1.31 -0.93
0.21 0.32 -0.26 -0.92 -1.43 -0.44 -1.81 1.77 -0.57 0.04 0.25 -0.89
- - - -0.89 -0.2 - - 3.09 1.06 - - -
0.49 -0.09 -0.15 -0.42 -0.41 -0.69 -1.65 0.86 0.2 0.12 -1.87 1.0
-0.08 0.74 -0.17 0.46 0.33 -1.09 -0.16 1.09 -0.57 -0.51 -0.61 -1.51
-0.11 0.52 -0.07 0.1 -1.56 -0.68 -0.88 1.57 0.44 0.49 -1.9 -3.21
0.21 -0.04 -0.25 -0.8 -0.14 -1.06 -0.11 0.84 -0.74 -1.24 -0.34 1.35
-0.13 -0.07 - -1.23 -0.8 -0.95 -0.43 1.32 -0.45 - 1.35 1.06
-1.11 -1.32 -0.87 0.04 -0.63 -1.26 0.47 1.28 -0.32 -1.99 1.37 0.08
0.03 -0.94 - -0.78 - 0.03 -1.08 1.44 -0.81 - 2.17 -0.79
-0.33 -0.03 -0.19 -0.79 -0.88 -1.12 -0.24 1.04 0.18 -0.03 1.01 -0.45
- - - - - - -2.51 2.26 0.33 - 2.08 0.63
0.62 0.63 -0.17 0.06 -0.18 -0.63 -1.44 1.01 -0.11 -0.38 -0.6 -0.47
0.54 0.24 0.2 -0.3 -0.32 -0.11 -0.38 0.45 0.17 -0.82 -0.02 -0.23
- - - -0.89 -0.2 - - 3.09 1.06 - - -
- - - - 0.02 -1.86 -1.6 2.28 -0.6 - 2.28 -
- -1.36 -0.59 -1.97 - -2.55 -1.52 2.46 1.18 - 0.62 -0.23
1.2 -0.63 1.24 -0.71 -1.68 0.2 -1.86 -0.32 -0.98 -2.67 0.06 0.88
0.79 0.51 -0.07 -0.23 -0.65 -0.73 -1.26 1.01 0.12 -1.16 0.15 -0.46
1.07 0.21 0.62 0.04 -1.35 -1.61 -0.07 1.01 -1.15 -1.51 0.33 -1.15
-2.25 -5.78 -3.42 -3.42 -4.09 -4.18 -4.63 1.33 0.93 0.39 2.33 -0.6
-0.41 -0.44 -1.22 -0.49 -0.54 -1.79 0.08 0.94 0.92 -1.25 0.74 0.53
2.19 -0.7 0.85 -1.86 -5.1 -0.17 -2.7 -0.05 -1.19 -1.54 0.88 -3.64
- - -0.52 -1.86 -1.03 -0.08 -2.03 1.58 1.39 - 0.97 0.84
0.7 0.64 -2.28 -0.46 -0.56 -1.26 -0.34 1.35 0.52 -0.4 -0.01 -1.92
-1.74 1.41 -5.5 -0.74 0.88 -2.76 -0.91 1.8 0.44 -0.45 -2.12 -3.33
-2.15 -2.1 -3.33 -1.65 -1.96 -4.69 1.51 2.09 0.55 - 0.51 -0.26
0.27 0.48 -0.26 0.12 -0.72 -0.15 -0.48 0.46 -0.3 -0.7 0.4 0.17
0.25 0.72 -0.23 0.34 0.08 0.13 -0.33 0.18 -0.73 - -0.46 0.71
- -1.72 -4.26 -2.72 -3.02 -5.18 -2.2 1.19 -0.03 -0.58 1.88 1.82
-0.41 1.08 -1.39 0.18 0.71 -1.25 -0.09 0.72 -0.85 -0.93 0.37 -0.71
0.59 -0.74 -0.29 -1.41 -0.79 -0.44 -2.98 1.13 0.44 0.76 -0.63 0.47
- - - - -1.73 -2.57 -1.5 2.46 1.7 - - 1.28
- - - - - - - 3.58 - - - -
- - - - - - - 2.89 2.2 - - -
- - - -0.89 -0.2 - - 3.09 1.06 - - -
0.65 0.33 -0.02 -0.11 -0.54 -0.46 -0.21 0.4 -0.2 -0.22 0.58 -1.2
- 2.03 - -0.08 - - -2.08 2.43 -1.13 - -0.15 -
-0.51 -0.53 -0.82 -0.46 -2.78 -0.22 -1.78 1.78 0.51 0.98 -0.71 -0.78
-0.75 -0.47 -1.53 -0.47 0.13 -2.17 0.91 0.87 -0.65 0.33 -0.11 0.82
- - - -0.2 -2.14 - -2.75 2.61 0.83 - 1.16 -0.68
- - - -0.06 - - - 2.43 - - 2.5 -
- - - -0.06 - - -2.38 2.27 1.82 - 1.3 -
- - - - - - - 3.58 - - - -
- - - - - - - 3.58 - - - -
-0.63 0.27 -1.71 -1.03 0.59 -0.76 -1.73 1.35 0.4 -0.66 -0.64 0.86
0.74 0.44 0.14 0.16 0.11 -0.31 -0.71 0.8 -0.0 -1.8 -0.4 -1.06
0.13 0.24 -0.71 -0.69 -0.03 -1.08 -0.83 1.0 0.54 0.89 -0.7 -0.85
- - 2.11 - - - - 1.26 1.65 - 1.1 -
- -1.81 -1.04 -1.96 -0.22 -3.04 -1.69 1.96 -0.05 1.16 1.09 -1.09
- - - - -0.24 -1.12 - 2.63 1.86 - -0.21 -
0.22 0.13 0.3 0.17 -0.29 -0.41 -0.33 0.95 0.36 -0.7 -1.67 -0.2
- - - -0.64 0.14 - 0.7 2.5 0.82 - 0.27 -
0.45 0.5 -0.72 -1.21 0.64 -3.64 -0.64 1.69 1.3 - - -2.36
-1.42 -1.53 -2.7 -2.19 -2.31 -3.08 -2.54 1.51 0.46 -1.17 2.46 -2.06
- - -0.87 -1.79 -0.97 -1.52 -0.09 1.77 0.76 - 1.1 1.08
- - - - - - - 2.24 0.82 - 2.46 -
-0.08 0.01 -0.26 -0.39 -0.08 0.09 -0.22 0.98 -0.05 -0.22 0.4 -1.12
0.37 0.45 0.52 -0.12 -0.94 0.18 -0.71 0.41 0.05 0.23 -0.19 -1.75
-0.83 -0.78 -1.01 -0.69 -0.45 -0.83 -2.19 1.03 -0.18 1.04 0.24 1.05
0.97 0.18 0.4 0.15 -0.93 -0.91 -0.45 0.82 0.36 -1.39 -1.18 -0.31
-0.23 0.42 -0.59 -0.03 -1.42 -0.76 -0.6 1.24 0.61 0.82 -0.54 -2.3
- - 2.11 - - - - 1.26 1.65 - 1.1 -
0.01 0.17 -0.31 -0.17 -0.45 -0.9 -0.25 0.52 -0.02 -0.72 1.22 -0.48
0.64 0.14 -1.2 -0.85 -0.74 -0.87 0.06 0.71 -0.33 0.09 0.94 -0.42
-1.99 -3.94 -4.75 -2.53 -4.83 -4.22 -1.8 2.34 0.67 - 2.14 -4.38
-1.81 -1.76 -2.72 -1.69 0.16 -1.86 -2.03 2.35 1.52 0.38 -4.35 -
0.8 0.43 0.72 -0.4 -0.88 -0.3 -0.41 -0.15 -0.62 0.39 -2.23 0.39
- -0.09 -0.32 -0.95 0.6 -2.25 -0.75 1.71 1.21 - -0.28 0.04
- -2.71 -1.94 -1.44 -1.7 - 1.83 2.45 0.03 - -0.5 -2.58
- - - - - - - 1.45 2.78 - 1.27 -
- - - - - - - - 3.58 - - -
-0.46 -1.42 0.96 0.27 -1.23 -1.33 0.61 0.44 - 0.22 -1.72 1.36
2.05 0.46 -0.35 -0.41 -1.56 -2.73 -2.52 0.56 -0.64 -2.06 0.81 -2.57
- - - -0.49 0.35 -0.54 -0.27 1.79 -2.71 - 0.54 1.78
- - - - - - - 2.98 2.05 - - -
1.92 0.22 0.42 -0.92 -1.66 0.18 - 0.03 -3.59 1.3 -2.65 -
1.26 0.53 -1.5 -0.62 -2.0 0.06 -5.34 1.14 0.8 0.42 -3.4 -1.13
-1.29 -0.66 -0.88 -2.38 -1.96 -1.5 0.36 1.54 1.34 -0.62 0.91 -1.52
-0.3 0.21 -2.47 -0.12 -1.24 -2.13 -0.65 1.14 0.22 0.99 0.44 -0.11
- -0.24 - 0.57 -0.57 -1.71 1.33 2.12 -0.88 - -1.43 -0.11
1.73 -0.13 0.65 -0.65 -1.22 0.24 -1.77 0.34 -0.48 -0.26 -1.09 -1.43
0.44 0.2 0.22 0.25 -0.94 -0.13 -0.04 0.23 -0.22 -0.95 0.64 -0.69
-0.84 -0.2 -0.02 -0.12 -0.3 -2.05 -0.71 1.39 -0.28 - 1.55 -0.65
-0.77 -0.47 -0.69 -0.62 -0.07 -1.15 -0.66 0.92 0.34 1.3 0.03 -0.45
- 0.82 - 0.96 - - -2.04 2.33 0.14 - - 0.95
-1.15 -1.69 -0.33 -2.15 -1.24 -2.15 -1.73 1.17 1.01 2.17 -2.33 -1.74
-0.5 - -0.67 -2.6 0.24 -2.91 -2.4 0.77 0.57 2.2 - 0.27
0.9 - -0.86 - -1.95 -1.09 -3.01 0.24 -0.24 2.6 -1.93 -1.49
- - - - 0.13 1.48 - 1.09 1.39 - 1.74 -
- - -0.4 -4.37 -2.49 -0.66 -1.26 1.2 0.72 2.28 -0.14 -2.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.