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  5. TP24G00340.1

TP24G00340.1


Description : Clp protease proteolytic subunit /Translocation-enhancing protein TepA [Interproscan].


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP24G00340.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001420.2 tig00001420_g8689.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.01 OrthoFinder
Cre12.g500950 30792003, CLPP4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre16.g682900 30778138, CLPR2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Dusal.0070s00013.1 33189316 Clp protease proteolytic subunit... 0.01 OrthoFinder
Dusal.0549s00008.1 33192513 Clp protease proteolytic subunit... 0.01 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD36731 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
OT_17G01480.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Sro178_g078080.1 Contig275.g3533 Protease proteolytic subunit 0.05 OrthoFinder
Sro20_g014090.1 Contig2954.g23439 Protease proteolytic subunit 0.03 OrthoFinder
Sro22_g015350.1 Contig426.g5759 Protease proteolytic subunit 0.04 OrthoFinder
Sro37_g023390.1 Contig1425.g13155 Protease proteolytic subunit 0.04 OrthoFinder
Transcript_contig_56182 56182 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_002502598.1 MICPUN_108326, 108326 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_002507019.1 MICPUN_107465, 107465 Clp protease proteolytic subunit... 0.04 OrthoFinder
XM_003056341.1 MicpuC2_55345, 55345 ATP-dependent clp protease (CLP) 0.02 OrthoFinder
XM_003056496.1 MicpuC2_55668, 55668 Endopeptidase clp chloroplast precursor 0.02 OrthoFinder
XM_003064166.1 MicpuC2_23295, 23295 Clp protease proteolytic subunit... 0.01 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20461.1_5391 PRW20461 ATP-dependent Clp protease proteolytic subunit-related... 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498561.1_7514 KAA8498561 ATP-dependent Clp protease proteolytic subunit 2 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 8 184
No external refs found!