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  5. TP22G03200.1

TP22G03200.1


Description : Chitin binding domain; Glycoside hydrolase family 18, catalytic domain; Cellulose/chitin-binding protein, N-terminal [Interproscan].


Gene families : OG_01_0001785 (OrthoFinder) Phylogenetic Tree(s): OG0001785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP22G03200.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
EOD34344 No alias Cellulose/chitin-binding protein, N-terminal; Glycoside... 0.02 OrthoFinder
TP04G06340.1 No alias Glycoside hydrolase family 18, catalytic domain [Interproscan]. 0.06 OrthoFinder
TP05G08110.1 No alias Glycoside hydrolase family 18, catalytic domain [Interproscan]. 0.06 OrthoFinder
TP07G01540.1 No alias Chitin binding domain; Glycoside hydrolase family 18,... 0.04 OrthoFinder
TP10G00490.1 No alias Glycoside hydrolase family 18, catalytic domain [Interproscan]. 0.03 OrthoFinder
TP12G00330.1 No alias Glycoside hydrolase family 18, catalytic domain [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR004302 Cellulose/chitin-bd_N 15 292
IPR001223 Glyco_hydro18_cat 314 664
IPR002557 Chitin-bd_dom 749 801
IPR002557 Chitin-bd_dom 932 985
No external refs found!