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  5. TP20G00740.1

TP20G00740.1


Description : Small-subunit processome, Utp11 [Interproscan].


Gene families : OG_01_0003512 (OrthoFinder) Phylogenetic Tree(s): OG0003512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP20G00740.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.46 tig00020903_g15115.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cre13.g573050 30784706 Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder
OT_06G01550.1 No alias Small-subunit processome, Utp11 [Interproscan]. 0.05 OrthoFinder
PTI_13G01880.1 No alias Small-subunit processome, Utp11 [Interproscan]. 0.03 OrthoFinder
Sro49_g028910.1 Contig2054.g17641 Probable U3 small nucleolar RNA-associated protein 11 0.05 OrthoFinder
Sro691_g187730.1 Contig1133.g10868 Probable U3 small nucleolar RNA-associated protein 11 0.03 OrthoFinder
XM_002503012.1 MICPUN_82666, 82666 Small-subunit processome, Utp11 [Interproscan]. 0.02 OrthoFinder
XM_003058645.1 MicpuC2_17462, 17462 Small-subunit processome, Utp11 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001984.1_cds_GFH22174.1_16651 HaLaN_19595, GFH22174 U3 small nucleolar RNA-associated protein 11 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499440.1_8393 KAA8499440 Putative U3 small nucleolar RNA-associated protein 11 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR007144 SSU_processome_Utp11 11 169
No external refs found!