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  5. TP19G02230.1

TP19G02230.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002457 (OrthoFinder) Phylogenetic Tree(s): OG0002457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP19G02230.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000826.22 tig00000826_g4591.t1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
Cre06.g267500 30779119 Protein degradation.26S proteasome.20S core... 0.28 OrthoFinder
Cz09g20230.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
EOD15128 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.19 OrthoFinder
OT_01G05380.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
PTI_20G00550.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.31 OrthoFinder
Sro1555_g282100.1 Contig2965.g23556 Proteasome subunit beta type-3 0.34 OrthoFinder
Sro2100_g314500.1 Contig2796.g22497 Proteasome subunit beta type-3 0.33 OrthoFinder
Vocar.0002s0175.1 32890691 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_002508394.1 MICPUN_91802, 91802 Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
XM_003062753.1 MicpuC2_22152, 22152 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56889.1_9759 PRW56889 Proteasome subunit beta type-3-A 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497008.1_737 KAA8497008 Proteasome subunit beta type-3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!