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Description : 60S ribosomal protein L10P, insertion domain; Ribosomal protein L10P [Interproscan].
Gene families : OG_01_0003015 (OrthoFinder) Phylogenetic Tree(s): OG0003015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP16G01380.1 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g261700 | 30779803 | No description available | 0.11 | OrthoFinder | |
| Cz09g30160.t1 | No alias | Ribosomal protein L10P; 60S ribosomal protein L10P,... | 0.07 | OrthoFinder | |
| EOD42017 | No alias | 60S ribosomal protein L10P, insertion domain; Ribosomal... | 0.07 | OrthoFinder | |
| OT_17G00690.1 | No alias | Ribosomal protein L10P; 60S ribosomal protein L10P,... | 0.1 | OrthoFinder | |
| PTI_07G02090.1 | No alias | 60S ribosomal protein L10P, insertion domain; Ribosomal... | 0.04 | OrthoFinder | |
| Sro1552_g281880.1 | Contig3671.g28371 | Turnover protein 4 homolog | 0.22 | OrthoFinder | |
| Sro2516_g329950.1 | Contig716.g8270 | Turnover protein 4 homolog | 0.23 | OrthoFinder | |
| Transcript_contig_57106 | 57106 | Ribosomal protein L10P; 60S ribosomal protein L10P,... | 0.05 | OrthoFinder | |
| Vocar.0002s0474.1 | 32891090 | 60S ribosomal protein L10P, insertion domain; Ribosomal... | 0.03 | OrthoFinder | |
| XM_002508822.1 | MICPUN_85635, 85635 | Ribosomal protein L10P; 60S ribosomal protein L10P,... | 0.1 | OrthoFinder | |
| XM_003063924.1 | MicpuC2_30129, 30129 | 60S ribosomal protein L10P, insertion domain; Ribosomal... | 0.1 | OrthoFinder | |
| lcl|BLLF01002268.1_cds_GFH23419.1_17896 | HaLaN_21028, GFH23419 | Ribosome assembly factor mrt4 | 0.02 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45636.1_1527 | PRW45636 | MRNA turnover 4-like protein | 0.15 | OrthoFinder | |
| lcl|VRMN01000006.1_cds_KAA8493760.1_4522 | KAA8493760 | MRNA turnover protein 4-like | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0042254 | ribosome biogenesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |