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  5. TP16G01250.1

TP16G01250.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002503 (OrthoFinder) Phylogenetic Tree(s): OG0002503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP16G01250.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.74 tig00020848_g14605.t1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder
Cre10.g424400 30789754 Protein degradation.26S proteasome.20S core... 0.2 OrthoFinder
Cz01g21220.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
Dusal.0023s00001.1 33198027 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
EOD26305 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
PTI_08G00690.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.28 OrthoFinder
Sro25_g016920.1 Contig1417.g13031 Beta type-7 0.26 OrthoFinder
Transcript_contig_55787 55787 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0331.1 32883543 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002504489.1 MICPUN_107407, 107407 Hypothetical protein (PSB7) 0.02 OrthoFinder
XM_003059798.1 MicpuC2_27663, 27663 Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01001402.1_cds_GFH19077.1_13554 HaLaN_15969, GFH19077 Proteasome subunit beta 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57945.1_8500 PRW57945 Proteasome subunit beta type-7-A 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492784.1_2520 KAA8492784 Proteasome subunit beta type-7-B 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 50 231
No external refs found!