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  5. TP15G01530.1

TP15G01530.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP15G01530.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cre01.g021600 30789366 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cre06.g291150 30779565 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz05g19260.t1 No alias Helicase, C-terminal; WW domain; DEAD/DEAH box helicase... 0.03 OrthoFinder
OT_12G00350.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain; WW... 0.03 OrthoFinder
Sro1046_g235060.1 Contig1884.g16427 Dependent RNA helicase 0.04 OrthoFinder
Sro3572_g349270.1 Contig4413.g33150 RNA helicase DBP2 0.03 OrthoFinder
SymbC1.scaffold12489.1 12489.1 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
Vocar.0007s0049.1 32888024 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
XM_002499634.1 MICPUN_67469, 67469 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_002502908.1 MICPUN_82978, 82978 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_002504616.1 MICPUN_97883, 97883 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_003063731.1 MicpuC2_22564, 22564 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_003064188.1 MicpuC2_46013, 46013 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_003064706.1 MicpuC2_45119, 45119 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 300 410
IPR011545 DEAD/DEAH_box_helicase_dom 93 264
No external refs found!