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  5. TP13G00440.1

TP13G00440.1


Description : ATPase, AAA-type, core; Replication factor C, C-terminal [Interproscan].


Gene families : OG_01_0002295 (OrthoFinder) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP13G00440.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527300 30793001, RFC5 Cell cycle.interphase.DNA... 0.02 OrthoFinder
Cz05g24170.t1 No alias ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder
PTI_07G02450.1 No alias Replication factor C, C-terminal; ATPase, AAA-type, core... 0.02 OrthoFinder
Sro793_g203250.1 Contig534.g6933 Factor C small subunit 0.02 OrthoFinder
Vocar.0037s0052.1 32897481 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder
XM_002504219.1 MICPUN_107429, 107429 Hypothetical protein (RFC5) 0.01 OrthoFinder
XM_003060047.1 MicpuC2_18318, 18318 Replication factor C, C-terminal; ATPase, AAA-type, core... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499312.1_8265 KAA8499312 Replication factor C subunit 5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 37 157
IPR013748 Rep_factorC_C 224 308
No external refs found!