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  5. TP12G00490.1

TP12G00490.1


Description : High mobility group box domain [Interproscan].


Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP12G00490.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000488.11 tig00000488_g1347.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021623.8 tig00021623_g23009.t1 No description available 0.01 OrthoFinder
PTI_09G04160.1 No alias High mobility group box domain [Interproscan]. 0.03 OrthoFinder
PTI_27G00160.1 No alias High mobility group box domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 36 104
No external refs found!