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  5. TP11G01570.1

TP11G01570.1


Description : Inner centromere protein, ARK-binding domain; SAP domain [Interproscan].


Gene families : OG_01_0005416 (OrthoFinder) Phylogenetic Tree(s): OG0005416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP11G01570.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020704.32 tig00020704_g13173.t1 No description available 0.05 OrthoFinder
Cre13.g580250 30784727 No description available 0.04 OrthoFinder
Cz08g07210.t1 No alias Inner centromere protein, ARK-binding domain [Interproscan]. 0.04 OrthoFinder
Dusal.0164s00009.1 33198396 Inner centromere protein, ARK-binding domain [Interproscan]. 0.03 OrthoFinder
OT_05G00500.1 No alias Inner centromere protein, ARK-binding domain [Interproscan]. 0.04 OrthoFinder
PTI_08G00900.1 No alias Inner centromere protein, ARK-binding domain [Interproscan]. 0.07 OrthoFinder
Sro421_g139520.1 Contig1157.g11065 Inner centromere protein, ARK binding region 0.07 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492377.1_9070 KAA8492377 Inner centromere protein-related protein pic1 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR005635 Inner_centromere_prot_ARK-bd 173 233
IPR003034 SAP_dom 53 85
No external refs found!