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  5. TP11G00520.1

TP11G00520.1


Description : Pseudouridine synthase, RsuA/RluA [Interproscan].


Gene families : OG_01_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP11G00520.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
PTI_22G01270.1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
Sro102_g052200.1 Contig319.g4264 Pseudouridine synthase C 0.02 OrthoFinder
Sro218_g090150.1 Contig1136.g10916 Ribosomal large subunit pseudouridine synthase 0.02 OrthoFinder
Vocar.0005s0071.1 32884023 Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.03 OrthoFinder
XM_003057907.1 MicpuC2_70854, 70854 RNA pseudouridylate synthase 0.03 OrthoFinder
XM_003058206.1 MicpuC2_57549, 57549 Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 181 305
No external refs found!