TP10G02750.1

Description : DNA topoisomerase, type IIA, subunit A/C-terminal; TOPRIM domain; DNA topoisomerase, type IIA, subunit B, domain 2; C-terminal associated domain of TOPRIM; Histidine kinase/HSP90-like ATPase [Interproscan].

Gene families : OG_01_0001339 (OrthoFinder) Phylogenetic Tree(s): OG0001339_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP10G02750.1
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021433.2	tig00021433_g21256.t1	DNA topoisomerase 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre01.g009250	30789357, TOP2	Cell cycle.interphase.DNA replication.preinitiation.TOP2...	0.02	OrthoFinder
Cz11g19140.t1	No alias	DNA topoisomerase, type IIA, subunit B, domain 2; TOPRIM...	0.02	OrthoFinder
Dusal.0487s00005.1	33203263	Histidine kinase/HSP90-like ATPase; C-terminal...	0.01	OrthoFinder
EOD17812	No alias	Putative DNA topoisomerase II [Ensembl].	0.03	OrthoFinder
OT_13G00120.1	No alias	TOPRIM domain; DNA topoisomerase, type IIA, subunit B,...	0.02	OrthoFinder
PTI_12G02730.1	No alias	TOPRIM domain; DNA topoisomerase, type IIA, subunit...	0.02	OrthoFinder
SymbC1.scaffold924.9	924.9	Histidine kinase/HSP90-like ATPase [Interproscan].	0.02	OrthoFinder
Vocar.0024s0199.1	32890400	Histidine kinase/HSP90-like ATPase; TOPRIM domain; DNA...	0.02	OrthoFinder
lcl\|BLLF01001294.1_cds_GFH18390.1_12867	HaLaN_15188, GFH18390	DNA topoisomerase 2	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	None	Extended
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	IEP	Enrichment
BP	GO:0006486	protein glycosylation	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Enrichment
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0016758	hexosyltransferase activity	IEP	Enrichment
BP	GO:0043413	macromolecule glycosylation	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002205	Topo_IIA_A/C	683	1138
IPR031660	TOPRIM_C	547	681
IPR013506	Topo_IIA_bsu_dom2	269	400
IPR003594	HATPase_C	52	201
IPR006171	TOPRIM_domain	430	531

External Links

No external refs found!

TP10G02750.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation