TP09G02630.1

Description : UmuC domain; SAC3/GANP/THP3 [Interproscan].

Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP09G02630.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
PTI_05G02680.1	No alias	UmuC domain; DNA polymerase, Y-family, little finger...	0.02	OrthoFinder
Sro88_g046710.1	Contig265.g3329	DNA polymerase eta	0.01	OrthoFinder
Transcript_contig_90956	90956	Hypothetical protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004518	nuclease activity	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Enrichment
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Enrichment
MF	GO:0016972	thiol oxidase activity	IEP	Enrichment
MF	GO:0019781	NEDD8 activating enzyme activity	IEP	Enrichment
BP	GO:0045116	protein neddylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005062	SAC3/GANP/THP3_conserved	1159	1407
IPR001126	UmuC	23	361

External Links

No external refs found!