1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP08G01830.1

TP08G01830.1


Description : tRNA methyltransferase TRMD/TRM10-type domain [Interproscan].


Gene families : OG_01_0000848 (OrthoFinder) Phylogenetic Tree(s): OG0000848_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP08G01830.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278500 30779053 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
Dusal.0095s00006.1 33190271 tRNA methyltransferase TRMD/TRM10-type domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56099.1_10304 PRW56099 TRNA-methyltransferase isoform 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
InterPro domains Description Start Stop
IPR016009 tRNA_MeTrfase_TRMD/TRM10 163 367
No external refs found!