TP07G05800.1

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: TP07G05800.1
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000718.1	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00000718.2	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00000718.3	tig00000718_g3679.t1	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00001024.2	tig00001729_g9740.t1	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00001729.6	tig00001729_g9740.t1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder
Cpa\|evm.model.tig00020553.191	tig00020553_g10681.t1	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cre02.g097800	30785105	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz03g28180.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
Cz05g17060.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD08599	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
EOD26066	No alias	EF-hand domain; ABC transporter type 1, transmembrane...	0.03	OrthoFinder
EOD37777	No alias	Multidrug resistance-associated protein, ABC superfamily...	0.01	OrthoFinder
OT_03G00040.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.03	OrthoFinder
PTI_01G01590.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
PTI_03G06590.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.06	OrthoFinder
Sro1322_g262550.1	Contig3764.g28905	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
Sro183_g079600.1	Contig3056.g24305	Multiple drug resistance-associated protein-like transporter 1	0.04	OrthoFinder
Sro399_g134960.1	Contig279.g3623	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
Sro983_g227840.1	Contig79.g823	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
XM_002508173.1	MICPUN_94915, 94915	ATP-binding cassette superfamily	0.03	OrthoFinder
lcl\|BLLF01000618.1_cds_GFH13488.1_7965	HaLaN_09381, GFH13488	ABC transporter	0.02	OrthoFinder
lcl\|BLLF01003175.1_cds_GFH26596.1_21073	HaLaN_24770, GFH26596	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61038.1_93	PRW61038	Multidrug resistance-associated 1 isoform X8	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004832	valine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006612	protein targeting to membrane	IEP	Enrichment
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0006721	terpenoid metabolic process	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Enrichment
BP	GO:0010639	negative regulation of organelle organization	IEP	Enrichment
BP	GO:0010824	regulation of centrosome duplication	IEP	Enrichment
BP	GO:0010826	negative regulation of centrosome duplication	IEP	Enrichment
BP	GO:0010948	negative regulation of cell cycle process	IEP	Enrichment
BP	GO:0016114	terpenoid biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016744	transketolase or transaldolase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0032886	regulation of microtubule-based process	IEP	Enrichment
BP	GO:0033043	regulation of organelle organization	IEP	Enrichment
CC	GO:0036038	MKS complex	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0044782	cilium organization	IEP	Enrichment
BP	GO:0045786	negative regulation of cell cycle	IEP	Enrichment
BP	GO:0046605	regulation of centrosome cycle	IEP	Enrichment
BP	GO:0046606	negative regulation of centrosome cycle	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051129	negative regulation of cellular component organization	IEP	Enrichment
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Enrichment
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0060271	cilium assembly	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Enrichment
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	537	772
IPR011527	ABC1_TM_dom	2	180
IPR003439	ABC_transporter-like_ATP-bd	877	1027
IPR003439	ABC_transporter-like_ATP-bd	241	386

External Links

No external refs found!

TP07G05800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation