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  5. TP07G03350.1

TP07G03350.1


Description : RNA recognition motif domain; SWAP/Surp [Interproscan].


Gene families : OG_01_0002691 (OrthoFinder) Phylogenetic Tree(s): OG0002691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G03350.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
EOD12424 No alias SWAP/Surp; RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
PTI_28G01250.1 No alias RNA recognition motif domain; SWAP/Surp [Interproscan]. 0.02 OrthoFinder
Sro598_g173050.1 Contig1655.g14931 U2 snRNP-associated SURP motif-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000061 Surp 142 206
IPR000504 RRM_dom 16 79
No external refs found!