1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP07G02510.1

TP07G02510.1


Description : Aminotransferase class-III [Interproscan].


Gene families : OG_01_0001271 (OrthoFinder) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G02510.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001234.16 tig00001234_g7738.t1 Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic... 0.07 OrthoFinder
Cre03.g158000 30786587, GSA1 Coenzyme metabolism.tetrapyrrol... 0.08 OrthoFinder
Cz11g23070.t1 No alias Aminotransferase class-III [Interproscan]. 0.06 OrthoFinder
EOD13875 No alias Glutamate 1-semialdehyde 2,1-aminomutase [Ensembl]. 0.04 OrthoFinder
OT_20G00080.1 No alias Aminotransferase class-III [Interproscan]. 0.09 OrthoFinder
PTI_10G00960.1 No alias Aminotransferase class-III [Interproscan]. 0.2 OrthoFinder
Sro1597_g284880.1 Contig93.g1079 Glutamate-1-semialdehyde 2,1-aminomutase 0.29 OrthoFinder
Sro479_g151140.1 Contig1858.g16249 Glutamate-1-semialdehyde 2,1-aminomutase 0.26 OrthoFinder
SymbC1.scaffold4424.2 4424.2 Aminotransferase class-III [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold9.412 9.412 Membrane insertase YidC/ALB3/OXA1/COX18;... 0.01 OrthoFinder
Transcript_contig_54213 54213 Aminotransferase class-III [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0198.1 32892853 Aminotransferase class-III [Interproscan]. 0.04 OrthoFinder
XM_002508313.1 MICPUN_61667, 61667 Glutamate-1-semialdehyde 2,1-aminomutase (HEML) 0.09 OrthoFinder
XM_003062903.1 MicpuC2_29561, 29561 Glutamate-1-semialdehyde 2,1-aminomutase (HEML) 0.05 OrthoFinder
lcl|BLLF01004474.1_cds_GFH29687.1_24164 HaLaN_28387, GFH29687 Glutamate-1-semialdehyde aminotransferase 0.01 OrthoFinder
lcl|BLLF01006299.1_cds_GFH32141.1_26618 HaLaN_31310, GFH32141 Glutamate-1-semialdehyde aminotransferase 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57872.1_8221 PRW57872 Glutamate-1-semialdehyde aminotransferase 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498009.1_6962 KAA8498009 Glutamate-1-semialdehyde 2,1-aminomutase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 19 368
No external refs found!