Description : Transketolase, C-terminal domain; Transketolase-like, pyrimidine-binding domain; Deoxyxylulose-5-phosphate synthase [Interproscan].
Gene families : OG_01_0001797 (OrthoFinder) Phylogenetic Tree(s): OG0001797_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: TP07G02240.1 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000217.39 | tig00000217_g19171.t1 | Secondary metabolism.terpenoids.methylerythritol... | 0.03 | OrthoFinder | |
Cz02g35280.t1 | No alias | Transketolase-like, pyrimidine-binding domain;... | 0.01 | OrthoFinder | |
EOD35929 | No alias | Deoxyxylulose-5-phosphate synthase; Transketolase-like,... | 0.03 | OrthoFinder | |
OT_02G01590.1 | No alias | Transketolase, C-terminal domain;... | 0.04 | OrthoFinder | |
PTI_00G03430.1 | No alias | Transketolase, C-terminal domain; Transketolase-like,... | 0.03 | OrthoFinder | |
Sro197_g083720.1 | Contig3509.g27177 | Deoxy-D-xylulose-5-phosphate synthase | 0.03 | OrthoFinder | |
Transcript_contig_90606 | 90606 | Transketolase-like, pyrimidine-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
XM_002507265.1 | MICPUN_107366, 107366 | Hypothetical protein (DXS) | 0.02 | OrthoFinder | |
lcl|BLLF01002335.1_cds_GFH23688.1_18165 | HaLaN_21341, GFH23688 | Transketolase_1 domain-containing protein | 0.03 | OrthoFinder | |
lcl|BLLF01007192.1_cds_GFH32821.1_27298 | HaLaN_32104, GFH32821 | 1-deoxyxylulose 5-phosphate synthase | 0.02 | OrthoFinder | |
lcl|LHPG02000022.1_cds_PRW20607.1_5279 | PRW20607 | 1-deoxy-D-xylulose 5-phosphate synthase | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEA | Interproscan |
BP | GO:0016114 | terpenoid biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004832 | valine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005261 | cation channel activity | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Enrichment |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015252 | proton channel activity | IEP | Enrichment |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
MF | GO:0020037 | heme binding | IEP | Enrichment |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Enrichment |
MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Enrichment |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
MF | GO:0070402 | NADPH binding | IEP | Enrichment |
No external refs found! |