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  5. TP07G01100.1

TP07G01100.1


Description : Pre-mRNA-splicing factor Isy1 [Interproscan].


Gene families : OG_01_0002783 (OrthoFinder) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP07G01100.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cre10.g427150 30789885 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cz01g20100.t1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.01 OrthoFinder
OT_04G03230.1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001783.1_cds_GFH21219.1_15696 HaLaN_18477, GFH21219 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR009360 Isy1 1 278
No external refs found!