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Description : WD40 repeat [Interproscan].
Gene families : OG_01_0013596 (OrthoFinder) Phylogenetic Tree(s): OG0013596_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: TP06G05530.1 | |
| Cluster | HCCA: Cluster_40 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Enrichment |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016852 | sirohydrochlorin cobaltochelatase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0036260 | RNA capping | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001680 | WD40_repeat | 33 | 65 |
| No external refs found! |