1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP06G04600.1

TP06G04600.1


Description : MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan].


Gene families : OG_01_0002239 (OrthoFinder) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G04600.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.164 tig00000144_g9157.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.01 OrthoFinder
EOD16047 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.02 OrthoFinder
OT_11G01820.1 No alias MCM, AAA-lid domain; MCM domain; MCM OB domain [Interproscan]. 0.03 OrthoFinder
OT_14G01130.1 No alias MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.02 OrthoFinder
XM_002505503.1 MICPUN_95766, 95766 MCM domain; MCM, AAA-lid domain; MCM OB domain; MCM... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 208 430
IPR033762 MCM_OB 30 156
IPR041562 MCM_lid 446 533
No external refs found!