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  5. TP06G03210.1

TP06G03210.1


Description : Krr1, KH1 domain [Interproscan].


Gene families : OG_01_0003127 (OrthoFinder) Phylogenetic Tree(s): OG0003127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G03210.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000507.12 tig00000507_g1764.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre12.g549700 30791977 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
OT_07G03000.1 No alias Krr1, KH1 domain [Interproscan]. 0.06 OrthoFinder
PTI_02G00840.1 No alias Krr1, KH1 domain [Interproscan]. 0.08 OrthoFinder
Sro203_g085730.1 Contig1270.g11867 Protein PNO1 0.15 OrthoFinder
XM_002499601.1 MICPUN_56017, 56017 Kh-domain-containing protein 0.07 OrthoFinder
XM_003058130.1 MicpuC2_16093, 16093 Krr1, KH1 domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60165.1_6533 PRW60165 Pre-rRNA-processing PNO1 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041174 KH_8 34 100
No external refs found!