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  5. TP06G02610.1

TP06G02610.1


Description : Proteasomal ATPase OB C-terminal domain; ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0002509 (OrthoFinder) Phylogenetic Tree(s): OG0002509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G02610.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001187.20 tig00001187_g7469.t1 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.05 OrthoFinder
Cre10.g439150 30790715, RPT5 Protein degradation.26S proteasome.regulatory... 0.11 OrthoFinder
Cz06g04180.t1 No alias ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal... 0.06 OrthoFinder
EOD04234 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.05 OrthoFinder
OT_06G04090.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.08 OrthoFinder
PTI_01G00490.1 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.26 OrthoFinder
Sro536_g162160.1 Contig299.g3946 26S protease regulatory subunit 6A 0.28 OrthoFinder
Transcript_contig_55825 55825 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
Vocar.0001s1300.1 32885813 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.07 OrthoFinder
XM_002507809.1 MICPUN_107027, 107027 AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... 0.11 OrthoFinder
XM_003062143.1 MicpuC2_35637, 35637 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.05 OrthoFinder
lcl|BLLF01001710.1_cds_GFH20854.1_15331 HaLaN_18048, GFH20854 26S protease regulatory subunit 6A 0.01 OrthoFinder
lcl|BLLF01002897.1_cds_GFH25715.1_20192 HaLaN_23722, GFH25715 AAA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44323.1_2448 PRW44323 26S protease regulatory subunit 6A-like protein 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495478.1_1476 KAA8495478 26S protease regulatory subunit 6A-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 63 147
IPR003959 ATPase_AAA_core 205 343
IPR041569 AAA_lid_3 367 410
No external refs found!