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  5. TP06G02360.1

TP06G02360.1


Description : SF3A2 domain; Zinc-finger of C2H2 type [Interproscan].


Gene families : OG_01_0003351 (OrthoFinder) Phylogenetic Tree(s): OG0003351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP06G02360.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre06.g252700 30779714, SPL2 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
XM_003059906.1 MicpuC2_44451, 44451 SF3A2 domain; Zinc-finger of C2H2 type [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000834.1_cds_GFH15312.1_9789 HaLaN_11515, GFH15312 Matrin-type domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493436.1_9737 KAA8493436 Splicing factor 3A subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR031781 SF3A2_dom 121 218
No external refs found!