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  5. TP05G04700.1

TP05G04700.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002281 (OrthoFinder) Phylogenetic Tree(s): OG0002281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G04700.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.44 tig00020554_g10827.t1 Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder
Cre10.g461950 30789807 Protein degradation.26S proteasome.20S core... 0.24 OrthoFinder
Cz15g12180.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
OT_15G00470.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_07G02220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.27 OrthoFinder
Sro1101_g241430.1 Contig3867.g29745 Proteasome subunit pbs-5 0.26 OrthoFinder
Transcript_contig_55415 55415 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Vocar.0029s0037.1 32887548 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002506771.1 MICPUN_96064, 96064 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_003061006.1 MicpuC2_60944, 60944 Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56251.1_10324 PRW56251 20S proteasome beta subunit type beta 5 isoform B 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495411.1_1409 KAA8495411 Proteasome subunit beta type-5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 64 243
No external refs found!