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  5. TP05G03050.1

TP05G03050.1


Description : Pre-SET CXC domain; SET domain [Interproscan].


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP05G03050.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cz02g12250.t1 No alias SET domain; PHD-like zinc-binding domain; SAND domain... 0.02 OrthoFinder
Cz03g13010.t1 No alias PWWP domain; SET domain; AWS domain [Interproscan]. 0.02 OrthoFinder
EOD24560 No alias SET domain [Interproscan]. 0.02 OrthoFinder
EOD37382 No alias SET domain [Interproscan]. 0.02 OrthoFinder
EOD41237 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_01G03700.1 No alias SET domain; Zinc finger, PHD-finger; Bromodomain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78818 78818 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.02 OrthoFinder
XM_003059701.1 MicpuC2_59369, 59369 Set domain protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR041355 Pre-SET_CXC 113 144
IPR001214 SET_dom 183 286
No external refs found!