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  5. TP04G07390.1

TP04G07390.1


Description : ATPase, AAA-type, core; Replication factor C, C-terminal [Interproscan].


Gene families : OG_01_0003725 (OrthoFinder) Phylogenetic Tree(s): OG0003725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07390.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251800 30778780, RFC4 Cell cycle.interphase.DNA... 0.02 OrthoFinder
Sro262_g102000.1 Contig809.g9020 Factor C small subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 252 336
IPR003959 ATPase_AAA_core 51 176
No external refs found!