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  5. TP04G07250.1

TP04G07250.1


Description : Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0002675 (OrthoFinder) Phylogenetic Tree(s): OG0002675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07250.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.78 tig00000615_g2608.t1 Protein degradation.26S proteasome.regulatory... 0.09 OrthoFinder
Cre02.g097650 30784849, RPN6 Protein degradation.26S proteasome.regulatory... 0.16 OrthoFinder
Cz03g09110.t1 No alias Proteasome component (PCI) domain; 6S proteasome subunit... 0.1 OrthoFinder
Dusal.0606s00002.1 33198918 Proteasome component (PCI) domain; 26S proteasome... 0.01 OrthoFinder
EOD27809 No alias 26S proteasome regulatory subunit Rpn6, N-terminal;... 0.11 OrthoFinder
OT_02G03780.1 No alias Proteasome component (PCI) domain; 26S proteasome... 0.08 OrthoFinder
PTI_13G00610.1 No alias 26S proteasome regulatory subunit Rpn6, N-terminal;... 0.22 OrthoFinder
Sro413_g138100.1 Contig3915.g30010 ATPase regulatory subunit 11 0.27 OrthoFinder
XM_002503138.1 MICPUN_108424, 108424 6S proteasome subunit Rpn6, C-terminal helix domain; 26S... 0.07 OrthoFinder
XM_003061156.1 MicpuC2_19844, 19844 6S proteasome subunit Rpn6, C-terminal helix domain; 26S... 0.08 OrthoFinder
lcl|BLLF01001701.1_cds_GFH20804.1_15281 HaLaN_17986, GFH20804 PCI domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20641.1_5188 PRW20641 26S proteasome non-ATPase regulatory subunit 11-like protein 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496331.1_60 KAA8496331 26S proteasome non-ATPase regulatory subunit 11 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 179 281
No external refs found!