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  5. TP04G07160.1

TP04G07160.1


Description : Leo1-like protein [Interproscan].


Gene families : OG_01_0003884 (OrthoFinder) Phylogenetic Tree(s): OG0003884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G07160.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cre16.g694204 30777202 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder
Cz16g05290.t1 No alias Leo1-like protein [Interproscan]. 0.02 OrthoFinder
EOD20324 No alias Leo1-like protein [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEA Interproscan
BP GO:0016570 histone modification IEA Interproscan
CC GO:0016593 Cdc73/Paf1 complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004334 fumarylacetoacetase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005869 dynactin complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Enrichment
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007149 Leo1 213 436
No external refs found!