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  5. TP04G05650.1

TP04G05650.1


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G05650.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre17.g742200 30782802 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
XM_002506984.1 MICPUN_96161, 96161 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 426 476
IPR000408 Reg_chr_condens 274 323
IPR000408 Reg_chr_condens 327 382
No external refs found!