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  5. TP04G03310.1

TP04G03310.1


Description : Chitin binding domain [Interproscan].


Gene families : OG_01_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP04G03310.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
EOD11194 No alias Cellulose/chitin-binding protein, N-terminal [Interproscan]. 0.05 OrthoFinder
EOD23466 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD34486 No alias Cellulose/chitin-binding protein, N-terminal; Glycoside... 0.02 OrthoFinder
TP03G03580.1 No alias Hypothetical protein 0.05 OrthoFinder
TP03G04330.1 No alias Hypothetical protein 0.11 OrthoFinder
TP05G08000.1 No alias Hypothetical protein 0.11 OrthoFinder
TP05G08560.1 No alias Chitin binding domain [Interproscan]. 0.11 OrthoFinder
TP06G00130.1 No alias Hypothetical protein 0.08 OrthoFinder
TP06G00290.1 No alias Hypothetical protein 0.04 OrthoFinder
TP15G02460.1 No alias Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004568 chitinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006032 chitin catabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0046348 amino sugar catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901072 glucosamine-containing compound catabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002557 Chitin-bd_dom 185 238
IPR002557 Chitin-bd_dom 97 152
No external refs found!