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  5. TP03G07600.1

TP03G07600.1


Description : Sas10/Utp3/C1D [Interproscan].


Gene families : OG_01_0002261 (OrthoFinder) Phylogenetic Tree(s): OG0002261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G07600.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.45 tig00022075_g23606.t1 No description available 0.03 OrthoFinder
Cre09.g394399 30780529 No description available 0.09 OrthoFinder
Cz16g17190.t1 No alias Sas10 C-terminal domain [Interproscan]. 0.05 OrthoFinder
Cz16g17200.t1 No alias Sas10/Utp3/C1D [Interproscan]. 0.06 OrthoFinder
EOD14890 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.08 OrthoFinder
OT_02G03770.1 No alias Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.04 OrthoFinder
PTI_01G09370.1 No alias Sas10 C-terminal domain [Interproscan]. 0.07 OrthoFinder
PTI_04G05740.1 No alias Hypothetical protein 0.09 OrthoFinder
Sro408_g136920.1 Contig3193.g25227 About silencing protein 10 0.16 OrthoFinder
Sro98_g050440.1 Contig3362.g26336 Inherit from NOG: Neuroguidin, EIF4E binding protein 0.06 OrthoFinder
Vocar.0009s0185.1 32893539 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.02 OrthoFinder
XM_002502780.1 MICPUN_59233, 59233 Sas10 C-terminal domain; Sas10/Utp3/C1D [Interproscan]. 0.09 OrthoFinder
XM_003060898.1 MicpuC2_60704, 60704 Sas10/Utp3/C1D; Sas10 C-terminal domain [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01001084.1_cds_GFH17015.1_11492 HaLaN_13548, GFH17015 Sas10 domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45524.1_1307 PRW45524 Something about silencing 10 0.12 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497949.1_6902 KAA8497949 Neuroguidin 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007146 Sas10/Utp3/C1D 10 103
No external refs found!