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  5. TP03G00600.1

TP03G00600.1


Description : Condensin complex subunit 2/barren [Interproscan].


Gene families : OG_01_0002826 (OrthoFinder) Phylogenetic Tree(s): OG0002826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP03G00600.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021462.43 tig00021462_g21606.t1 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cre13.g589300 30784001 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz08g13030.t1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.05 OrthoFinder
EOD09357 No alias Condensin complex subunit 2/barren [Interproscan]. 0.04 OrthoFinder
OT_16G00210.1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.03 OrthoFinder
PTI_10G00180.1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.09 OrthoFinder
Sro293_g109920.1 Contig3203.g25313 Condensin complex subunit 2 0.07 OrthoFinder
SymbC1.scaffold3948.3 3948.3 Condensin complex subunit 2/barren [Interproscan]. 0.01 OrthoFinder
XM_002508713.1 MICPUN_61922, 61922 Condensin complex component, barren domain-containing... 0.04 OrthoFinder
XM_003063000.1 MicpuC2_48690, 48690 Condensin complex component, barren domain-containing... 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32517.1_3992 PRW32517 Condensin complex subunit 2 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492811.1_2547 KAA8492811 Condensin complex subunit 2 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 217 920
No external refs found!