1. Home
  2. Species
  3. Thalassiosira pseudonana
  4. Sequence
  5. TP02G04040.1

TP02G04040.1


Description : WW domain; U1-C, C2H2-type zinc finger [Interproscan].


Gene families : OG_01_0004486 (OrthoFinder) Phylogenetic Tree(s): OG0004486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TP02G04040.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
EOD10442 No alias U1-C, C2H2-type zinc finger [Interproscan]. 0.02 OrthoFinder
PTI_08G02080.1 No alias WW domain; U1-C, C2H2-type zinc finger [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33120.1_3586 PRW33120 U1 small nuclear ribonucleo C 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0009439 cyanate metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019310 inositol catabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0050113 inositol oxygenase activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 1 35
IPR001202 WW_dom 80 110
No external refs found!